|Home Downloads Documentation Contact Mesquite|
To install the NINJA package of modules
Once NINJA is installed, you can calculate a neighbor-joining tree
using the menus:
Taxa&Trees > Tree Inference > Neighbor-Joining (NINJA).
If you use NINJA from within Mesquite, please cite the paper that describes NINJA:
Wheeler, T.J. 2009. Large-scale neighbor-joining with NINJA. In S.L. Salzberg and T. Warnow (Eds.), Proceedings of the 9th Workshop on Algorithms in Bioinformatics. WABI 2009, pp. 375-389. Springer, Berlin.